CDS
| Accession Number | TCMCG066C27783 |
| gbkey | CDS |
| Protein Id | XP_034605244.1 |
| Location | complement(join(24383281..24384264,24384408..24384593,24385029..24385199,24385574..24385792,24385903..24386154,24386337..24386438,24386565..24386762,24386849..24387103,24387550..24387631,24387744..24387914,24388320..24388447,24388573..24388677,24389132..24389473,24389755..24389859)) |
| Gene | LOC117865205 |
| GeneID | 117865205 |
| Organism | Setaria viridis |
Protein
| Length | 1099aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034749353.1 |
| Definition | regulator of nonsense transcripts UPF2-like isoform X6 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Regulator of nonsense transcripts |
| KEGG_TC | - |
| KEGG_Module |
M00430
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14327
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03013
[VIEW IN KEGG] ko03015 [VIEW IN KEGG] map03013 [VIEW IN KEGG] map03015 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGAAGAACTGAAAACTGTAAACTTGAGCAAATTTGTCGGTGAAGCAGTTTCTTACATTTGTACTGCCAAGCTCCGTTCTACTGACATACAAGCTGCAGTTCAGATTTGCTCGCTACTCCATCAAAGATACATGGACTTCTCTCCTTGCCTTATTCAAGGACTCTTGAAGACCTTCTATCCTGAGATGTCTGGAGAACCAGATTTAGACAAGAATGCAAGAGCCATGAAGAAGAGAAGCACTCTTAAACTTCTAATGGAACTGTATTTTGTTGGAATTTTTGAAGATGTTAGTACTTTCACAACCATTATAAAGGGTCTTACATCACTGGAGCATTTGAAGGATCGGGAAACAACGCAGACAAATTTGTCTCTCCTTGCTAGTTTTGCTCGTCAAGGAAAATCTTTTCTTGGACTGCAACAACATGAGCAAGATGCTTATGATGAGTTCTTTACCGGCCTCAATATTACTTTTGATCAGAAGATATTCTTTAAGAAAGCCTTTTGCTCTTACTATGATGCAGCAAGCGAACTTCTCTTGTCAGAACATGCGTCTCTTCGTGTGATGGAATTGGAAAATGCAAAAATTTTGAATGCCAAAGGAGAACTCAGCGATGAGAATACTGCCTCATATGAGAATCTGCGAAGATCTTTTGATCAGTTATTGCACTGTGTTTCCTCCTTAGCTGAAGCTCTTGGTATGCAGCCTCCTGTTATGCCGGAAGATGGACATACAACAAGGATTACCACAGGCACTGACTTAACCACTTCTGAGAAAGAATCCTCTGTGGTACAACATATATGGGATGATGAGGACACCAAGGCTTTCTATGAATCTTTACCTGATCTCAGATCATTTGTGCCTGCTGTACTACTGGGACAAGCTGAACCAACATTGGCAGAGCAGCATGGAAAGGTTCACCAGCAATCTAATGAGTGTACCATGCAGTCAGAGACTGAAGTACAAGATACTGAACATCAATCCGGTGGAAAAACAAATGTGGAGCACAAGAATAGAGTGAACACTGAAAAAGAAAGAGTGGATAAAGAAACATCTGAAGAAATGATTGTTGGCAGGAAAGGAGATACTGAAAGAGAGAAAGTACGAGGCGTAGATGGTGCAAGCTTGGATAGCCTGCTGCAGAAGTTGCCAAGATGTGGTAGCCGTGATCTAGTTGATCAATTGGCAGTAGAGTTTTGCTACCTGAATTCTAAAGCAAACAGGAAGAAACTTGTGCGGGCCTTATTCAGTGTTCCAAGGACTTCTTTGGAACTGCTACCTTACTATTCCCGATTAGTTGCCACCTTGTCGCCATTTATGAAGAATCTTCCGAGTATGCTATTGTCAATGCTTGAAGAGGAGTTTAATTTTTTGATAAATAAGAAGGATCAGATCAAAATTGAAACTAAAATTAGAAACATTCGATTTATTGGGGAGTTGTGCAAATTCAAAATTGCGCCTTCATGCCTTGTTTTTGGCTGTTTGAAGGCTTGCTTAGATGATTTCACACATCATAACATTGATGTGGCCTGCAATCTTCTTGAGACCTGTGGACGCTTTCTTTATCGCTTGCCAGAAACTACAATTCGCATGTCAAACATGTTGGAGATACTGAAGAGATTGAAAAATGTCAAGAATTTGGATGCACACCATAGCACACTTGTAGAAAATGCCTATTACCTATGTAAACCTCCAGAAAGATCTTCCAGAGTCTCTAAACTTCGGCCACCTCTACATCAATACATAAGGAGGTTACTTTTCTCCGATCTTGACAAATCTACTGTTCAACATGTTCTTCTTCAATTGCTCAAGTTGTCTTGGGCAGACTGTGAACAGTACCTTGTGAAGTGTTTTCTAAAGGTTCACAAGGGAAAGTATAGCCATGTTCACCTGATTGCTTTACTCACTGCTAGTCTTAGTCACTATCATCATGACTTTGCTGTGACAGTGGTAGATGAGGTTCTAGAGGAGATTAGAGTTGGACTTGAGCTAAACGACTATGCGATGCAGCAGCAACGCCTTGCCCATATGCGGTTTCTTGGGGATCTATATAACTATGAGTATATTGATTCATCAGTTATATTTGAGACACTAAACCTTCTTACTATATTTGGTCATGGAACACCTGAGCAAGATCTGCTGGATCCCCCGGAAGATTGTTTCAGGATCAGGCTGATCGTTACACTTCTACAGACTTGTGGTCACCATTTTTCTAGAGGCTCTTCAAAAAGAAGGCTTGACAGATTTTTGCTACTTTTTCAAAGATATGCTCTCAGAAAAGGGCCGTTACCACTTGATGTAGAATTTGATGTTCAGGATATGTTTGCTGAGTTACGACCCAAAATGACGAGGCATTCATCCATAGAAGGATTAAATGATGCGCTTGTTGAGCTTGAAGAAAATGAGCGTGTGATGGCAGTTGAGAAAGGTGGAGACAAAAGGCACTTGGACAGTGAATCGCGGTTGAAACAATCTGAAAATGCTGCTTTTGATACAAATGGCAAGAGGGTAGCAAATAGACCTAAGAAAAATGTTAAGGGCCATGAAGACATAGGAGATAGTGAGAGCTCTTCAGATAGCAGAAGCAGATACCGTAGTGGACATGAAGACGGGGAAAGTTTTCCGTACGAGGAAACATTAGATGACAGGTTGGAAAATGAAGACCACAGTGAGGACATTGATGCACCTGTTGGTTCAGATGAAGAAGGAACTGTTGAGGTTCGACGGAAGGTGGTGCAAGTTGATGCTAAGGAACAAGAAGACTTTGACAGAGAACTGAAAGCCATTCTTCAGGAAAGCTTGGAGTCACGTAAGTTGGAGCTGGCTAGGCCCACTGTGAACATGACGATACCAATGAATGCCTTTGAGGGGTCAAAGGACTTGATGGCCATTGAAGCAACGGACAAAGAAAATGTGTGTGGTGACGGTGAGATTGGCAAACCTGGTGATCTCGGCGACGTGCGCGTCAAGGTGCTTGTGAAGAGAGGGCATAAGCAGCAGACGAAGCAAATGCTCATCCCCGGGGACTGCCCACTCGTGCAGAGCACGAAGCAGCAGAGTGCTGCTGAGCTCGAGGAGATGCAGAACATCAAGCGGAAAATTCTTGAGTACAACGAAAGGGAGGAAGAGCTGGACGCAGGGTCGCTGCAAGGCGGGGACTGGGACCAAGGAGGAAGCGGCAACATGCCTCTTGCTGGATGGCCGGGGCGTGTTAGCTGGGTTGGTCCAAACAGAGTTGGAGGCGTTCGGCGGCACTACTGGGTTGCTGGTGGGTTCTACCGTGGCTATGGAAGAAGGTGA |
| Protein: MEELKTVNLSKFVGEAVSYICTAKLRSTDIQAAVQICSLLHQRYMDFSPCLIQGLLKTFYPEMSGEPDLDKNARAMKKRSTLKLLMELYFVGIFEDVSTFTTIIKGLTSLEHLKDRETTQTNLSLLASFARQGKSFLGLQQHEQDAYDEFFTGLNITFDQKIFFKKAFCSYYDAASELLLSEHASLRVMELENAKILNAKGELSDENTASYENLRRSFDQLLHCVSSLAEALGMQPPVMPEDGHTTRITTGTDLTTSEKESSVVQHIWDDEDTKAFYESLPDLRSFVPAVLLGQAEPTLAEQHGKVHQQSNECTMQSETEVQDTEHQSGGKTNVEHKNRVNTEKERVDKETSEEMIVGRKGDTEREKVRGVDGASLDSLLQKLPRCGSRDLVDQLAVEFCYLNSKANRKKLVRALFSVPRTSLELLPYYSRLVATLSPFMKNLPSMLLSMLEEEFNFLINKKDQIKIETKIRNIRFIGELCKFKIAPSCLVFGCLKACLDDFTHHNIDVACNLLETCGRFLYRLPETTIRMSNMLEILKRLKNVKNLDAHHSTLVENAYYLCKPPERSSRVSKLRPPLHQYIRRLLFSDLDKSTVQHVLLQLLKLSWADCEQYLVKCFLKVHKGKYSHVHLIALLTASLSHYHHDFAVTVVDEVLEEIRVGLELNDYAMQQQRLAHMRFLGDLYNYEYIDSSVIFETLNLLTIFGHGTPEQDLLDPPEDCFRIRLIVTLLQTCGHHFSRGSSKRRLDRFLLLFQRYALRKGPLPLDVEFDVQDMFAELRPKMTRHSSIEGLNDALVELEENERVMAVEKGGDKRHLDSESRLKQSENAAFDTNGKRVANRPKKNVKGHEDIGDSESSSDSRSRYRSGHEDGESFPYEETLDDRLENEDHSEDIDAPVGSDEEGTVEVRRKVVQVDAKEQEDFDRELKAILQESLESRKLELARPTVNMTIPMNAFEGSKDLMAIEATDKENVCGDGEIGKPGDLGDVRVKVLVKRGHKQQTKQMLIPGDCPLVQSTKQQSAAELEEMQNIKRKILEYNEREEELDAGSLQGGDWDQGGSGNMPLAGWPGRVSWVGPNRVGGVRRHYWVAGGFYRGYGRR |